Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005432022 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 78022535 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCGTATG | 9860 | 0.0 | 17.951027 | 43 |
TATGCCG | 10160 | 0.0 | 17.217411 | 46 |
CGTATGC | 10845 | 0.0 | 16.129736 | 44 |
CTCGTAT | 10760 | 0.0 | 15.93646 | 42 |
CGTATCG | 6175 | 0.0 | 12.693793 | 3 |
TATCTCG | 14330 | 0.0 | 12.446318 | 39 |
ACCGATG | 15830 | 0.0 | 12.312539 | 32 |
GATCGGA | 14730 | 0.0 | 12.268 | 1 |
TCTCGTA | 14495 | 0.0 | 12.186122 | 41 |
GTATCGA | 7130 | 0.0 | 11.768451 | 4 |
ACACGTC | 16740 | 0.0 | 11.663109 | 13 |
ATCTCGT | 16060 | 0.0 | 11.127125 | 40 |
ACGTCTG | 17795 | 0.0 | 11.0685835 | 15 |
CGACCGT | 3975 | 0.0 | 11.039296 | 1 |
CCCGTAT | 9345 | 0.0 | 11.018229 | 1 |
CGATGTA | 19405 | 0.0 | 10.204114 | 34 |
TCACCGA | 20135 | 0.0 | 9.90302 | 30 |
CACCGAT | 19560 | 0.0 | 9.859011 | 31 |
GCGCTAA | 6420 | 0.0 | 9.781019 | 42 |
CGCGGGT | 10145 | 0.0 | 9.6384945 | 1 |