FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005432057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005432057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100059509
Sequences flagged as poor quality0
Sequence length75
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG65400.09.75856443
CTCGTAT65100.09.64449642
CGTATGC73050.08.78434244
TATGCCG80550.07.88083146
GATCGGA103500.06.60952951
TCTCGTA114850.05.88728241
ATCGGAA119850.05.67265032
Produced by FastQC (version 0.11.5)