FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005432059

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005432059
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences129637500
Sequences flagged as poor quality0
Sequence length75
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG81200.08.794332543
CTCGTAT84300.08.38905842
CGTATGC94000.08.00095844
TATGCCG102300.07.48676346
GATCGGA130150.06.18532231
ATCGGAA141250.05.96172
TCTCGTA154400.05.07185141
Produced by FastQC (version 0.11.5)