FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005432094

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005432094
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105664603
Sequences flagged as poor quality0
Sequence length75
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAT70150.08.65510642
TCGTATG71200.08.4790243
CGTATGC74650.08.36495344
TATCTCG77850.08.02072739
TATGCCG78150.07.460627646
CGCCAAT96500.06.68516933
GATCGGA97500.06.3786121
TCTCGTA116500.05.59659841
GTCACGC130650.05.360332529
ATCGGAA120400.05.18824672
Produced by FastQC (version 0.11.5)