Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005432190 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 85734789 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCGTAT | 5300 | 0.0 | 8.454159 | 42 |
CGTATGC | 5745 | 0.0 | 7.9792953 | 44 |
TCGTATG | 5765 | 0.0 | 7.951613 | 43 |
TATGCCG | 6110 | 0.0 | 7.5226545 | 46 |
TATCTCG | 6295 | 0.0 | 7.391634 | 39 |
GATCGGA | 8090 | 0.0 | 6.1441126 | 1 |
CGATGTA | 9125 | 0.0 | 5.439156 | 34 |
TCTCGTA | 9270 | 0.0 | 5.2425466 | 41 |
ATCGGAA | 10135 | 0.0 | 5.033529 | 2 |