FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005432212

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005432212
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62866807
Sequences flagged as poor quality0
Sequence length35-76
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13042982.074700564957912No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAAAAAAAAAAAAAGGGGGGGG1078700.17158498283521859No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA924920.14712374369514264No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG814790.12960575522787407No Hit
GTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGAT790940.1258120203241752No Hit
GGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAACGGAGCAGGTCAAAACTCCCGTGCTG715970.11388680834386897No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA707350.11251565551913588No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)