EGAF00005432382 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005432382
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14000318
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	97809	0.6986198456349348	No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC	25617	0.18297441529542402	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	25180	0.17985305762340542	No Hit
CCGGCCCAGGTCGGAAACGGAGCAGGTCAAAACTCCCGTGCTGATCAGTA	22362	0.15972494339057156	No Hit
GGTGAACCGGCCCAGGTCGGAAACGGAGCAGGTCAAAACTCCCGTGCTGA	21087	0.15061800739097497	No Hit
GGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAACGGAGCAGGTCAAAACTCCCGTGCTG	20459	0.1461323949927423	No Hit
CTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCAT	17060	0.12185437502205308	No Hit
GGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGAC	15896	0.11354027815653901	No Hit
GGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAACG	15249	0.10891895455517511	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATAGGG	31985	64.857475	36
CGGGTAA	5145	62.99949	49
ATATAGG	22475	62.261253	35
TAGGGGG	52375	59.624435	38
GCGGGTA	5495	59.396843	48
ATAGGGG	39065	58.952805	37
TATATAG	21680	58.928783	34
GTTTATA	25550	56.2735	31
GTTGGGA	20985	55.998127	19
AGAGCGG	6940	54.21268	8
CGGGTGA	8860	51.93171	49
TAAAGGG	20915	50.991287	36
TTATATA	28495	50.5543	33
GGTGAAT	20825	50.115692	51
GGGGAAT	36985	49.33756	51
GAATAAA	38435	48.354412	54
GCGGATA	3600	48.179638	48
TGTAGGG	9875	47.987537	36
TGGGGAA	44105	47.91526	20
GTAGGGG	11020	47.847404	37