Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005441002 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 69897193 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGATTCTGCGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAA | 3549470 | 5.078129532326141 | Illumina Single End PCR Primer 1 (96% over 31bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGATTCTGCGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAA | 2139647 | 3.061134372019775 | Illumina Single End PCR Primer 1 (96% over 32bp) |
ATCGGAAGAGCGGCGTGTAGGGAAAGAGTGTGATTCTGCGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAA | 81966 | 0.11726651168953238 | Illumina Single End PCR Primer 1 (96% over 31bp) |