FastQCFastQC Report
Thu 12 May 2022
EGAF00005441233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005441233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44819832
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACATGTAAGTATCTCGTATG775650.1730595509594949TruSeq Adapter, Index 15 (97% over 40bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA583160.13011204504291762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)