FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005441914

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005441914
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences259838499
Sequences flagged as poor quality0
Sequence length26
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACA2837270.10919359567267205No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT2737310.10534659069132014No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)