FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005441931

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005441931
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences338969703
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCCGAC9872834929.126009825131778No Hit
CAGTACTG8676310925.596125031858673No Hit
GCAGTAGA7816418723.059343153154902No Hit
AGTAGTCT7531405822.21852198985465No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)