FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005441940

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005441940
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences356443579
Sequences flagged as poor quality0
Sequence length8
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGCGGG13404074137.60503734589648No Hit
CAACGCCT11649301032.682033528790264No Hit
ACCATAAC6700898918.799325600981017No Hit
GTGTATTA3890083910.913603524332247No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)