FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005441947

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005441947
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences288691682
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA3897030.13498934132781837No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT3792990.13138549658663182No Hit
TGCCCTCCAATGGATCCTCGTTAAAG3361850.11645122494384856No Hit
CCACCTACTAAGAACGGCCATGCACC2927640.10141061147719524No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)