FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005441950

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005441950
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences290187759
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA3921500.13513664440959414No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT3813040.13139906428651252No Hit
TGCCCTCCAATGGATCCTCGTTAAAG3362340.11586774065132086No Hit
CCACCTACTAAGAACGGCCATGCACC2932360.10105043748588995No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)