FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005441997

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005441997
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences317866676
Sequences flagged as poor quality0
Sequence length8
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGATGAC9710826630.549998893246677No Hit
ACTTCATA9132373228.7302000792307No Hit
CTAGACCT8575652726.978772383173627No Hit
TGCCGTGG4367815113.74102864434899No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)