FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005441998

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005441998
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences317866676
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGT4190580.13183451794110057No Hit
TGCCCTCCAATGGATCCTCGTTAAAG3714210.11684804606570336No Hit
AGGTCCGTCTTGCGCCGGTCCAAGAA3627730.11412740856169522No Hit
GCTGCGGATATGGGTACGGCCCGGCG3509890.11042019390544733No Hit
CGTTCGTTATCGGAATTAACCAGACA3297770.10374695584635617No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)