FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005442001

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442001
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences305135843
Sequences flagged as poor quality0
Sequence length26
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGT4009870.13141261808433302No Hit
AGGTCCGTCTTGCGCCGGTCCAAGAA3575630.11718157935316698No Hit
TGCCCTCCAATGGATCCTCGTTAAAG3367510.110361010587668No Hit
GCTGCGGATATGGGTACGGCCCGGCG3342320.10953547663032166No Hit
CGTTCGTTATCGGAATTAACCAGACA3101930.10165734610207691No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)