FastQCFastQC Report
Wed 11 May 2022
EGAF00005442009

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442009
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences292183653
Sequences flagged as poor quality0
Sequence length8
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGCAGC13098034744.828088654227344No Hit
ACAATTCA7415315125.378952668512223No Hit
CATCACTT6928161923.711668427939053No Hit
GTGTGGAG177685366.081290249321374No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)