FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005442022

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442022
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences296706665
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGGATATGGGTACGGCCCGGCG4972690.16759616775039415No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT3529420.118953175521015No Hit
GTCTCGTTCGTTATCGGAATTAACCA3179740.10716779820230866No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)