FastQCFastQC Report
Thu 12 May 2022
EGAF00005442063

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442063
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences371913206
Sequences flagged as poor quality0
Sequence length8
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGGGCA13017668635.00189934099839No Hit
TGCCTCAT10520291328.286952789732347No Hit
AATAATGG9501195025.546807283847834No Hit
GTGTCATC4152165711.164340585421426No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)