FastQCFastQC Report
Wed 11 May 2022
EGAF00005442066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences310755406
Sequences flagged as poor quality0
Sequence length8
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGGGCA10810014934.786248899560576No Hit
TGCCTCAT8954765028.816119774920345No Hit
AATAATGG7898766725.417954273657912No Hit
GTGTCATC3411994010.979677051861167No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)