FastQCFastQC Report
Sun 5 Jun 2022
EGAF00005442069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences287639433
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGTACAC8189606928.471780849324645No Hit
ATTGCGTG7191126025.00048732887052No Hit
CGACTTGA7058448924.539225468435685No Hit
TACAGACT6324761521.98850635336915No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)