FastQCFastQC Report
Wed 11 May 2022
EGAF00005442075

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442075
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences314808068
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGTACAC9000990228.59199339198638No Hit
ATTGCGTG7925067125.17428206446094No Hit
CGACTTGA7647303524.291955249380713No Hit
TACAGACT6907446021.941769294171966No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)