FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005442132

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442132
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences310850219
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGAACT9272408129.829183102489626No Hit
GCATTCGG8163844826.26295334860292No Hit
CAGCGGAA7363071623.686879242636145No Hit
ATTACTTC6285697420.220984306271312No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)