FastQCFastQC Report
Sun 5 Jun 2022
EGAF00005442138

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442138
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences320299816
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGAACT9558588729.8426293819663No Hit
GCATTCGG8424026926.30044252039158No Hit
CAGCGGAA7644040423.865266285385562No Hit
ATTACTTC6403325619.99166181225655No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)