FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005442237

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442237
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences332032103
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGTGCGG10110712930.451010033809894No Hit
CTCGAAAT8749877526.35250453477988No Hit
GGTATGCA7253988021.847248908940593No Hit
ACACCTTC7088631921.349236522469635No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)