FastQCFastQC Report
Fri 27 May 2022
EGAF00005442304

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442304
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences353216395
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA4901510.13876790741834052No Hit
TGCCCTCCAATGGATCCTCGTTAAAG4398720.12453329070413054No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT4313090.12210899780005965No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)