FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005442309

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442309
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences352489737
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAGGCTC9965422128.27152411532481No Hit
AAGACGGA9228173026.179976411625283No Hit
GTCCTTCT8294278623.530553458355016No Hit
TCTTAAAG7761100022.01794601469489No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)