FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005442312

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442312
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences366004814
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCCTAC11009996530.081561987324022No Hit
TCTAGCGA9993869727.305295771328296No Hit
CTGTAACT9424652225.75007715608899No Hit
AGAGTGTG6171963016.86306508525869No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)