FastQCFastQC Report
Fri 27 May 2022
EGAF00005442313

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442313
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences366004814
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGT6229030.1701898379948631No Hit
GTCTCGTTCGTTATCGGAATTAACCA5315210.14522240682878013No Hit
TGCCCTCCAATGGATCCTCGTTAAAG4022110.10989227043336101No Hit
CGTTCGTTATCGGAATTAACCAGACA3947510.10785404587601954No Hit
AGGTCCGTCTTGCGCCGGTCCAAGAA3854780.10532047264274508No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)