FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005442316

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442316
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences359503252
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGT6155070.17121041230525502No Hit
GTCTCGTTCGTTATCGGAATTAACCA5244840.14589130893313867No Hit
TGCCCTCCAATGGATCCTCGTTAAAG3963920.11026103318809478No Hit
CGTTCGTTATCGGAATTAACCAGACA3867580.10758122432784002No Hit
AGGTCCGTCTTGCGCCGGTCCAAGAA3802740.10577762450949955No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)