FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005442331

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442331
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences309800098
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA4509440.1455596699004272No Hit
TGCCCTCCAATGGATCCTCGTTAAAG4256680.13740086034446639No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT4100930.13237342487864545No Hit
GCTGCGGATATGGGTACGGCCCGGCG3680610.11880596629120499No Hit
CGTTCGTTATCGGAATTAACCAGACA3562610.11499705852255734No Hit
AGGTCCGTCTTGCGCCGGTCCAAGAA3262120.10529757805305795No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)