FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005442334

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442334
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences299813617
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA4391720.14648167231176829No Hit
TGCCCTCCAATGGATCCTCGTTAAAG4154190.13855908352554913No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT3996500.1332994825248381No Hit
GCTGCGGATATGGGTACGGCCCGGCG3628960.12104053299220227No Hit
CGTTCGTTATCGGAATTAACCAGACA3432420.114485126938047No Hit
AGGTCCGTCTTGCGCCGGTCCAAGAA3154150.10520369393362144No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)