FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005442346

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442346
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences343568296
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGGATATGGGTACGGCCCGGCG5019530.14609991836965075No Hit
TGCCCTCCAATGGATCCTCGTTAAAG4088680.11900632414581117No Hit
CGTTCGTTATCGGAATTAACCAGACA4084470.11888378664601812No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)