FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005442349

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442349
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences286722227
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGT5155450.17980642986565532No Hit
GCTGCGGATATGGGTACGGCCCGGCG3535330.12330156740865436No Hit
TGCCCTCCAATGGATCCTCGTTAAAG3340490.11650614027910713No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)