FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005442352

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442352
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences280893065
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGT5077320.18075633159544185No Hit
GCTGCGGATATGGGTACGGCCCGGCG3503770.12473679262960799No Hit
TGCCCTCCAATGGATCCTCGTTAAAG3291310.11717306014657215No Hit
GTCTCGTTCGTTATCGGAATTAACCA2808960.10000104488161715No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)