FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005442382

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442382
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences360151122
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGT5447290.15125011883206071No Hit
GTCTCGTTCGTTATCGGAATTAACCA4629730.1285496481113281No Hit
TGCCCTCCAATGGATCCTCGTTAAAG4410190.12245387368250377No Hit
CGTTCGTTATCGGAATTAACCAGACA3782070.10501341711771761No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)