FastQCFastQC Report
Fri 27 May 2022
EGAF00005442397

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005442397
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences308350801
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA4172430.1353143882379602No Hit
TGCCCTCCAATGGATCCTCGTTAAAG3543080.11490419316277371No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT3389260.10991571901251523No Hit
GCTGCGGATATGGGTACGGCCCGGCG3334490.10813949531462382No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)