EGAF00005444707 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005444707
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1142457
Sequences flagged as poor quality	0
Sequence length	301
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT	37756	3.3048070955843416	No Hit
GCCATACTAGTCTTTGCCGCCTGCGAAGCAGCGGTGGGCCTAGCCCTACT	22950	2.0088283410229004	No Hit
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG	22915	2.0057647683895325	No Hit
AATTAGGCTGTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAA	15484	1.3553245330021173	No Hit
AATTAGGCTGTGGGTGGTTGGCCATGGGTATGTTGTTAAGAAGAGGAATT	10378	0.9083930511170223	No Hit
AATTAGGCTGTGGGTGGTTGTATATAGCCTAGAATTTTTCGTTCGGTAAG	5595	0.48973396810558295	No Hit
GGCAGGTCAATTTCACTGGTAGTAATATAATTGTTGGGACGATTAGTTTT	3198	0.27992300804319115	No Hit
GGCAGGTCAATTTCAGTGGTAGTAATATAATTGTTGGGACGATTAGTTTT	1972	0.17261043522863442	No Hit
AATTAGGCTGTGGGTGGTTGTGGGTATAATACTAAGTTGAGATGATATCA	1653	0.14468815894164944	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCTTAC	5870	205.28584	3
TAGTCTT	3655	204.99884	8
AGGCTGT	5790	194.36633	5
CTTACCC	6215	192.70364	5
ACCCCGC	6370	187.78311	8
ATTAGGC	6140	184.2477	2
AAGGTCC	145	183.04823	295
TCTTACC	6595	182.27113	4
TACCCCG	6590	181.29034	7
CCCCGCC	6815	175.94655	9
AAATCTT	7205	167.84828	1
TTAGGCT	6725	167.78157	3
TTACCCC	7190	166.77722	6
AGTCTTT	4540	165.0304	9
GCTGTGG	7000	160.55803	7
GCCATAC	4630	160.2227	1
GCAGGTC	6420	147.49425	2
CAGGTCA	6670	141.96597	3
GTCAATT	6650	141.94936	6
TAGGCTG	8040	140.52312	4