FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005445170

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005445170
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60772691
Sequences flagged as poor quality0
Sequence length85
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1360270.22382915378882928No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG709050.11667247053450372No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGC704340.11589745137334795TruSeq Adapter, Index 5 (100% over 50bp)
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG692450.11394098049730922No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)