FastQCFastQC Report
Wed 11 May 2022
EGAF00005445183

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005445183
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37580497
Sequences flagged as poor quality0
Sequence length85
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5585631.4863108383053052No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3173020.8443262472021059No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1664540.4429265531001359No Hit
TTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG477760.12712977159402655No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)