FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005445249

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005445249
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49190205
Sequences flagged as poor quality0
Sequence length85
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGC3841960.7810416728289706TruSeq Adapter, Index 11 (100% over 50bp)
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2464030.5009188312998492No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)