FastQCFastQC Report
Thu 12 May 2022
EGAF00005446985

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005446985
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65168186
Sequences flagged as poor quality0
Sequence length46
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12782411.9614494102996822No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12364191.8972739244268666No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4654540.71423501031623No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1029650.15799887386768752No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT861550.1322040788430109No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)