FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005446991

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005446991
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences139874827
Sequences flagged as poor quality0
Sequence length46
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA14953511.069063699360286No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14478871.035130502788754No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10321700.7379240583439649No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)