FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005447007

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005447007
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100057340
Sequences flagged as poor quality0
Sequence length46
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15324091.5315308202276814No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11502021.1495428521285895No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA9906680.990100276501454No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1133660.11330103318757026No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)