FastQCFastQC Report
Thu 12 May 2022
EGAF00005447009

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005447009
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76522228
Sequences flagged as poor quality0
Sequence length46
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10282761.3437611879256834No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9720211.2702466007654665No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2622980.34277360559862424No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT982160.12834963456631188No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT784040.10245911815322471No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)