FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005447041

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005447041
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108162895
Sequences flagged as poor quality0
Sequence length46
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13703051.2668900920227772No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1597910.14773180765917923No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1511030.13969947827302515No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)