FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005466463

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005466463
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10283495
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG151440.14726510782569543No Hit
AGGTGTCTGGGGAGCACTGTGTGTTCACGGCACAGAGGTAGGTGGCTGAA133430.12975160682238868No Hit
TGGGGAGCACTGTGTGTTCACGGCACAGAGGTAGGTGGCTGAATCACTGG126290.12280844207149418No Hit
CAGGTGTCTGGGGAGCACTGTGTGTTCACGGCACAGAGGTAGGTGGCTGA121100.11776151979458345No Hit
ACTGTGTGTTCACGGCACAGAGGTAGGTGGCTGAATCACTGGGCTGGGAG120090.11677936343626365No Hit
CACTGTGTGTTCACGGCACAGAGGTAGGTGGCTGAATCACTGGGCTGGGA119430.11613755829122299No Hit
GGGAGCACTGTGTGTTCACGGCACAGAGGTAGGTGGCTGAATCACTGGGC110060.10702587009572134No Hit
GGAGCACTGTGTGTTCACGGCACAGAGGTAGGTGGCTGAATCACTGGGCT105670.10275689344916294No Hit
GGCACAGAGGTAGGTGGCTGAATCACTGGGCTGGGAGTCTCTGATGAGCA103290.10044250519886477No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)