FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005466988

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005466988
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74169057
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1059160.14280348744355748No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT955330.12880438806172229No Hit
CTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGCGTT764710.10310364334280264No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)