FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005466996

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005466996
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78786127
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGGGAGAAGAACGA14586871.8514515886788037No Hit
ACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGGGAGAAGAACG2121240.2692402940431378No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1550490.19679733717587106No Hit
CACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGGGAGAAGAAC1488770.18896347068818345No Hit
CTCCCTCTCACTCCCCAATACGGGGAGAAGAACGATCATCAATGGCTGAC1249990.15865610451951775No Hit
CCGCGTTCTCTCCCTCTCACTCCCCAATACGGGGAGAAGAACGATCATCA1203750.1527870509487032No Hit
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTC1120530.14222427763202525No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA928270.11782150428590048No Hit
CAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGGGAGAAGAACGATC848740.1077270875366167No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)